Aufgabensammlung Numerische Methoden. Loesungen by Hagander N., Sundblad Y. PDF

By Hagander N., Sundblad Y.

ISBN-10: 3486338722

ISBN-13: 9783486338720

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The log-odds score of smi is counted in both M0 and Mi and must be subtracted from the sum. s = arg max 0<|sd |

Unlike the model of Brown and Wilson, we use independent CM components to profile the interleaving stems in a pseudoknot. Based on the model, we have developed a generic framework for modeling interleaving stems of pseudoknot structures; we propose an algorithm that can efficiently assign stems to components such that interleaving stems are profiled in different components. The components with more stems are associated with higher weights in determining the overall conformation of a sequence segment.

For the sake of the proof, we now detail the alignment of the elements of c1 in case (b). Since all the repeaters and two terminals of S 1 are active, at least a terminal of either Sx1i or Sx1k is active. By construction, there is a repeater rep of Sx1i such that (δ, rep[1]) ∈ P and (rep[2], θ) ∈ P , where δ (resp. θ) is a base C of Sxsi (resp. the first base of the terminal in Sx1i ), as illustrated in Figure 5. Moreover, by construction, there is a repeater rep of Sx1k such that (δ , rep [1]) ∈ P and (rep [2], θ ) ∈ P , where δ (resp.

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Aufgabensammlung Numerische Methoden. Loesungen by Hagander N., Sundblad Y.

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